Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018802.1 Corchorus olitorius cultivar O-4 contig18835, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8071

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4565--4645
39
2.2
36
82
10
92
59
22
11
7
1.56
4819--4854
7
5.1
7
96
0
63
72
0
2
25
0.98
4819--4879
21
3.0
20
80
4
68
65
1
3
29
1.18
5011--5193
93
2.0
93
88
0
276
32
15
2
49
1.58
5227--5288
31
2.0
31
96
0
115
30
22
4
41
1.74
5324--5508
93
2.0
93
91
0
298
33
11
2
51
1.53
6603--6698
45
2.2
44
87
7
135
37
20
4
37
1.72
7961--8005
12
3.5
13
81
9
56
57
11
0
31
1.33

Tables:   1

The End!