Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018814.1 Corchorus olitorius cultivar O-4 contig18847, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12250

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
931--969
2
20.0
2
84
5
53
53
0
0
46
1.00
1470--1509
22
1.9
22
85
10
57
52
15
0
32
1.43
2844--3061
109
2.0
109
93
0
373
43
14
11
30
1.81
7831--8007
61
2.9
61
87
3
232
25
4
21
48
1.69
10570--10629
29
2.0
30
87
6
86
36
8
18
36
1.81

Tables:   1

The End!