Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018816.1 Corchorus olitorius cultivar O-4 contig18849, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22380

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6093--6165
33
2.2
33
82
4
85
36
20
13
28
1.91
6397--6442
21
2.2
21
100
0
92
28
13
23
34
1.92
9912--9950
19
2.1
19
100
0
78
28
5
25
41
1.77
12108--12197
45
2.0
45
93
0
153
23
20
18
37
1.94
20330--20404
29
2.6
28
73
10
71
22
24
13
40
1.90
20595--20666
29
2.4
31
86
6
96
43
9
18
29
1.81

Tables:   1

The End!