Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018821.1 Corchorus olitorius cultivar O-4 contig18854, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  59299

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4744--4805
33
1.9
32
93
3
106
51
14
6
27
1.66
6212--6315
45
2.3
44
83
3
118
33
11
21
33
1.89
16220--16291
35
2.1
35
97
0
135
29
15
19
36
1.92
20444--20574
50
2.7
49
76
11
126
32
12
6
48
1.66
29665--29703
19
2.1
19
100
0
78
17
20
25
35
1.95
32430--32490
31
2.0
31
100
0
122
54
13
16
16
1.72
32465--32557
44
2.1
44
86
7
127
48
8
19
23
1.76
36865--36943
38
2.1
38
100
0
158
31
30
8
29
1.88
42550--42574
1
25.0
1
100
0
50
0
0
0
100
0.00

Tables:   1

The End!