Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018834.1 Corchorus olitorius cultivar O-4 contig18867, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17188

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2969--3198
69
3.3
69
91
0
361
20
30
23
25
1.99
3184--3238
22
2.5
22
100
0
110
27
23
32
16
1.96
10847--10875
12
2.4
12
100
0
58
58
13
0
27
1.36
11873--11998
27
5.1
27
63
21
87
22
7
49
21
1.73
11915--11988
24
3.1
24
69
7
78
21
5
50
22
1.69
11745--12382
48
13.3
48
80
2
555
24
4
49
20
1.68
15299--15442
71
2.0
72
83
4
184
26
8
22
43
1.81
16031--16102
27
2.6
29
84
4
94
34
13
30
20
1.92
17032--17069
20
1.9
20
88
0
58
39
7
23
28
1.83
17145--17186
2
21.0
2
90
0
66
45
4
0
50
1.23

Tables:   1

The End!