Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018836.1 Corchorus olitorius cultivar O-4 contig18869, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17733

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1553--1616
21
3.2
21
66
20
55
39
3
7
50
1.47
1548--1629
39
2.0
40
90
4
130
39
3
7
50
1.48
1849--1878
13
2.3
13
94
0
51
50
0
10
40
1.36
7577--7626
25
2.0
25
96
0
91
36
18
32
14
1.90
11938--12020
22
3.7
22
79
6
78
40
10
12
36
1.77
11960--12016
23
2.5
23
88
2
80
40
8
14
36
1.76
12140--12199
26
2.3
26
83
13
70
45
5
1
48
1.34
12137--12199
27
2.4
27
82
15
78
44
4
1
49
1.33
13688--13830
22
6.5
22
78
6
114
39
9
13
37
1.77
13675--13830
43
3.5
44
75
7
131
39
8
15
36
1.77
17318--17733
48
8.5
48
78
5
246
23
4
50
21
1.67
17676--17712
15
2.5
15
90
0
56
18
0
56
24
1.41
17343--17730
96
4.0
95
77
4
294
23
4
50
21
1.67

Tables:   1

The End!