Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018837.1 Corchorus olitorius cultivar O-4 contig18870, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8369

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
59--502
48
9.2
48
81
4
448
23
4
49
22
1.68
59--977
144
6.2
143
77
7
642
25
4
48
22
1.70
474--520
18
2.6
18
86
0
67
17
0
59
23
1.37
472--521
24
2.1
24
85
7
66
16
0
62
22
1.33
378--616
114
2.1
114
90
0
370
22
3
50
23
1.64
289--680
210
1.9
210
88
1
597
25
4
48
22
1.68
424--568
66
2.2
66
82
1
175
23
2
53
20
1.58
496--985
48
10.1
48
82
1
530
25
4
48
21
1.70
5807--5859
25
2.1
25
82
0
61
50
20
1
26
1.58
7599--7726
48
2.7
48
83
0
166
24
6
48
21
1.73
7638--7798
75
2.1
75
81
0
178
25
4
49
20
1.67
7713--8369
48
13.7
48
83
1
676
25
4
50
19
1.67
7662--7801
75
1.9
75
86
0
199
27
4
49
19
1.67
7713--8369
144
4.6
144
85
0
798
25
4
50
19
1.67

Tables:   1

The End!