Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018840.1 Corchorus olitorius cultivar O-4 contig18873, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4516

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
66--95
12
2.5
12
100
0
60
43
6
0
50
1.28
187--235
22
2.2
22
82
7
55
38
12
8
40
1.72
1956--1985
12
2.5
12
100
0
60
43
6
0
50
1.28
2048--2109
22
2.8
22
78
7
63
35
16
11
37
1.84
2077--2125
22
2.2
22
82
7
55
38
12
8
40
1.72
2714--3065
118
3.0
118
93
2
598
32
7
24
35
1.83
3262--3308
17
2.6
19
77
9
55
63
2
4
29
1.25
3375--3405
9
3.4
9
95
0
53
51
0
3
45
1.17
3279--3513
130
1.8
130
93
1
409
43
6
9
40
1.62
3791--3836
18
2.6
17
82
6
56
50
2
0
47
1.13

Tables:   1

The End!