Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018842.1 Corchorus olitorius cultivar O-4 contig18875, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27251

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
269--385
45
2.5
46
77
9
139
26
23
7
41
1.81
4124--4219
34
2.8
34
87
0
129
27
15
18
38
1.91
7286--7358
28
2.5
28
82
4
83
58
27
6
6
1.49
10415--10778
52
7.0
52
88
4
527
35
20
15
28
1.93
12715--12764
26
1.9
26
91
0
82
14
2
38
46
1.56
12881--12945
20
3.2
20
86
4
85
27
9
23
40
1.85
13452--13488
2
18.5
2
94
0
65
0
0
48
51
1.00
15010--15053
21
2.1
21
100
0
88
27
13
9
50
1.72
20334--21368
437
2.4
438
84
4
1280
42
13
13
30
1.83

Tables:   1

The End!