Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018843.1 Corchorus olitorius cultivar O-4 contig18876, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33190

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6520--6907
206
1.9
206
93
0
668
36
12
4
46
1.61
8123--8149
10
2.7
10
100
0
54
92
0
0
7
0.38
9845--9873
7
4.1
7
100
0
58
31
0
27
41
1.56
11189--11221
2
16.5
2
93
0
57
45
3
0
51
1.16
22141--22217
28
2.7
29
97
2
147
51
9
6
32
1.59
29580--29720
70
2.0
70
92
0
237
41
9
12
36
1.77
30874--31053
91
2.0
91
88
6
267
35
20
15
29
1.92
32608--32680
30
2.4
30
84
6
85
38
10
23
27
1.88

Tables:   1

The End!