Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018849.1 Corchorus olitorius cultivar O-4 contig18882, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20632

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--33
2
16.5
2
100
0
66
48
0
0
51
1.00
483--511
11
2.6
11
100
0
58
6
31
27
34
1.83
3625--3680
25
2.2
26
80
6
69
30
3
14
51
1.59
4321--4391
30
2.3
31
83
7
83
33
15
15
35
1.89
6873--6914
21
2.0
21
100
0
84
23
19
9
47
1.78
6818--6982
86
1.9
86
97
0
312
29
14
6
49
1.67
8880--8916
6
6.2
6
100
0
74
16
0
67
16
1.23
14183--14326
72
2.0
72
95
2
263
13
13
21
52
1.74
14701--14938
124
1.9
124
91
2
390
36
9
2
50
1.49
15157--15193
18
2.2
18
85
9
51
16
35
29
18
1.93
19538--19693
80
2.0
79
90
1
249
23
31
11
33
1.90

Tables:   1

The End!