Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018852.1 Corchorus olitorius cultivar O-4 contig18885, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9270

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
445--486
20
2.1
20
86
8
59
23
30
26
19
1.98
4725--4966
122
2.0
121
79
5
256
53
2
9
34
1.46
4987--5057
27
2.4
29
86
9
92
30
19
9
39
1.84
5694--5757
31
2.0
32
96
3
121
15
0
42
42
1.47
8904--9264
34
11.7
30
79
18
388
36
16
14
32
1.88
9114--9270
27
5.3
27
78
18
161
36
16
14
32
1.89
8904--9270
62
6.0
62
96
2
672
36
16
14
32
1.89

Tables:   1

The End!