Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018854.1 Corchorus olitorius cultivar O-4 contig18887, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  48106

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
16205--16253
4
11.8
4
79
16
55
69
4
0
26
1.06
16193--16253
23
2.7
23
87
7
81
67
3
0
29
1.07
17874--17931
18
3.2
18
95
0
107
12
48
22
17
1.80
28476--28580
52
2.0
52
100
0
210
26
5
27
40
1.79
29579--29629
21
2.4
21
93
3
84
25
31
9
33
1.88
35696--35744
16
3.2
16
77
11
50
22
0
10
67
1.20
36371--36403
2
16.5
2
100
0
66
51
0
0
48
1.00
38834--38885
26
2.0
26
96
0
95
50
21
0
28
1.49
45145--45470
84
3.9
84
88
6
475
41
26
10
21
1.85
45144--45471
41
7.8
43
80
11
351
41
26
10
21
1.85

Tables:   1

The End!