Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01001888.1 Corchorus olitorius cultivar O-4 contig01888, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1106

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
133--164
2
16.0
2
93
0
55
50
3
0
46
1.17
76--241
77
2.2
76
94
1
287
45
9
7
37
1.65
210--248
2
20.0
2
94
5
71
51
0
0
48
1.00
275--343
35
2.0
35
94
0
120
37
14
17
30
1.90
335--375
20
2.0
20
95
0
73
43
14
4
36
1.67
848--887
21
2.1
19
86
13
55
20
27
15
37
1.92

Tables:   1

The End!