Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018882.1 Corchorus olitorius cultivar O-4 contig18915, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15116

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2724--2763
18
2.2
18
86
4
53
45
5
20
30
1.72
4069--4117
21
2.3
21
82
6
64
20
6
6
67
1.35
5753--5854
33
3.0
33
87
5
141
37
18
16
27
1.93
14003--14074
36
2.0
36
94
2
128
31
20
12
34
1.90
14102--14166
2
34.0
2
75
20
59
53
1
3
41
1.25
14103--14177
10
7.1
10
77
17
55
57
1
2
38
1.21
14102--14188
46
2.0
43
90
6
138
56
2
4
36
1.33

Tables:   1

The End!