Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018887.1 Corchorus olitorius cultivar O-4 contig18920, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26289

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11757--11786
16
1.9
16
93
6
53
10
10
0
80
0.92
23622--23950
168
2.0
166
90
1
525
37
9
16
36
1.81
24827--24864
11
3.5
11
85
10
51
57
2
0
39
1.12
25488--25656
84
2.0
84
100
0
338
36
5
9
48
1.60
26076--26117
2
21.0
2
100
0
84
50
0
0
50
1.00
26172--26202
15
2.1
15
93
0
53
67
0
3
29
1.06

Tables:   1

The End!