Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018889.1 Corchorus olitorius cultivar O-4 contig18922, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9797

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
452--492
18
2.3
18
87
4
57
24
12
19
43
1.85
1120--1196
38
2.0
38
85
5
102
37
24
16
20
1.93
5011--5113
24
4.2
24
70
18
79
36
12
7
42
1.72
5070--5125
24
2.3
24
90
3
85
30
8
8
51
1.64
5569--5608
15
2.6
16
92
4
64
65
10
10
15
1.48
8880--8952
21
3.4
21
76
1
65
16
20
43
19
1.88
9122--9161
15
2.6
16
88
4
55
62
12
10
15
1.54

Tables:   1

The End!