Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018895.1 Corchorus olitorius cultivar O-4 contig18928, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  77359

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11163--11223
19
3.3
19
63
9
54
40
16
9
32
1.81
11161--11253
36
2.6
36
100
0
186
38
19
10
31
1.86
32976--33032
9
6.3
9
81
0
51
29
35
0
35
1.58
32980--33034
18
3.1
18
69
10
58
29
34
0
36
1.58
44898--45021
61
2.0
61
88
0
185
42
14
21
20
1.88
53769--53809
2
20.5
2
100
0
82
48
0
0
51
1.00
56191--56448
106
2.5
104
89
3
380
42
9
8
39
1.69
58999--59033
17
2.1
17
88
0
52
74
0
2
22
0.95
59160--59362
99
2.0
101
83
7
259
50
2
12
33
1.56
59727--59841
31
3.7
31
78
9
126
35
25
15
23
1.94
59728--59845
62
1.9
61
84
5
157
36
24
14
24
1.93

Tables:   1

The End!