Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018899.1 Corchorus olitorius cultivar O-4 contig18932, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  39488

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5582--5652
35
2.0
35
83
0
88
21
8
25
45
1.80
7759--7804
17
2.6
18
86
6
67
89
8
2
0
0.57
7760--7804
23
2.0
23
90
0
72
88
8
2
0
0.58
10710--10762
20
2.7
20
100
0
106
20
13
26
39
1.89
11799--11830
6
5.3
6
96
0
55
43
0
0
56
0.99
22196--22257
25
2.6
24
87
5
81
59
4
6
29
1.43
24262--24385
41
3.0
42
92
2
214
45
15
8
30
1.77
24453--24565
60
1.9
59
87
7
169
39
1
23
35
1.65
24744--24814
2
33.5
2
83
10
88
46
1
7
45
1.39
26453--26495
21
2.0
21
95
0
77
13
25
23
37
1.92
32892--32925
13
2.6
13
85
0
50
55
0
0
44
0.99

Tables:   1

The End!