Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018903.1 Corchorus olitorius cultivar O-4 contig18936, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1851

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
86--139
21
2.6
21
96
0
99
37
24
3
35
1.73
248--299
22
2.4
22
81
12
63
32
13
7
46
1.72
346--475
21
6.2
21
69
12
88
30
7
7
53
1.57
364--476
42
2.7
43
76
10
117
30
7
7
53
1.57
346--490
63
2.3
63
81
11
170
28
8
10
52
1.64
607--656
21
2.4
20
83
6
64
30
12
14
44
1.81
607--706
21
4.9
21
69
19
59
30
10
14
46
1.77

Tables:   1

The End!