Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018905.1 Corchorus olitorius cultivar O-4 contig18938, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10133

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
595--636
17
2.5
17
100
0
84
40
7
19
33
1.78
1996--2354
117
3.1
116
81
4
418
27
33
22
16
1.96
1996--2360
58
6.2
58
82
3
394
27
33
21
16
1.95
3758--3790
14
2.3
15
89
10
59
6
0
45
48
1.27
5419--5665
99
2.5
99
86
0
343
13
29
23
33
1.93
5618--5800
24
7.5
24
65
15
72
15
27
19
37
1.92
5587--5817
73
3.2
74
88
1
315
14
27
22
35
1.93
5634--5819
25
7.6
25
66
14
84
15
28
21
34
1.93
9253--9310
29
2.1
28
84
9
75
63
13
10
12
1.51
9283--9334
24
2.2
24
82
6
61
59
15
13
11
1.61

Tables:   1

The End!