Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018909.1 Corchorus olitorius cultivar O-4 contig18942, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8861

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
200--272
31
2.4
31
83
4
85
24
19
16
39
1.91
344--395
20
2.5
19
79
14
50
65
5
5
23
1.36
1566--1614
17
2.9
17
100
0
98
40
18
6
34
1.75
3444--3776
43
7.9
43
78
10
346
39
26
9
24
1.86
3444--3771
84
3.9
84
88
4
475
39
26
10
23
1.86

Tables:   1

The End!