Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018918.1 Corchorus olitorius cultivar O-4 contig18951, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23496

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
450--687
125
1.9
126
86
3
347
36
10
1
51
1.45
840--961
31
4.1
31
88
8
182
32
14
13
39
1.85
1105--1178
29
2.5
30
88
4
105
45
13
16
24
1.83
3298--3362
29
2.2
29
83
0
76
40
26
10
23
1.87
4142--4185
22
2.0
22
90
0
70
22
40
13
22
1.89
12626--12661
19
1.9
18
88
5
54
41
8
22
27
1.82
14911--14950
15
2.6
16
92
4
64
65
12
7
15
1.47
19082--19115
11
3.1
11
82
0
50
38
11
14
35
1.83
21065--21095
3
10.3
3
100
0
62
35
0
0
64
0.94

Tables:   1

The End!