Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018926.1 Corchorus olitorius cultivar O-4 contig18959, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  37326

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1018--1099
31
2.5
33
82
11
89
42
3
3
50
1.37
3702--3739
2
19.0
2
100
0
76
50
0
0
50
1.00
6541--6580
21
2.0
20
85
5
53
57
10
2
30
1.45
16273--16309
2
18.5
2
100
0
74
51
0
0
48
1.00
18245--18295
19
2.7
19
77
14
61
50
1
0
47
1.12
19223--19264
11
3.8
11
81
9
50
2
14
0
83
0.75
19223--19264
16
2.4
18
88
7
61
2
14
0
83
0.75
23223--23324
48
2.1
48
84
10
129
33
35
5
25
1.80
24378--24408
2
15.5
2
100
0
62
51
0
0
48
1.00
33192--33670
99
4.8
99
78
8
479
21
25
17
34
1.96
33235--33668
201
2.2
201
95
0
778
20
26
17
35
1.95

Tables:   1

The End!