Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018927.1 Corchorus olitorius cultivar O-4 contig18960, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13237

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2033--2134
33
3.1
33
92
1
161
25
29
18
26
1.98
3135--3176
17
2.7
15
86
13
66
33
9
9
47
1.68
4349--4404
26
2.1
26
83
3
67
35
19
12
32
1.89
7922--7972
24
2.1
25
85
3
68
17
5
5
70
1.28
11638--11851
112
1.9
112
89
1
331
30
26
10
32
1.90
12422--12463
20
2.2
19
83
12
50
7
7
2
83
0.89
13177--13213
2
18.5
2
100
0
74
51
48
0
0
1.00
13213--13237
2
12.5
2
100
0
50
52
0
0
48
1.00

Tables:   1

The End!