Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018930.1 Corchorus olitorius cultivar O-4 contig18963, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18094

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2042--2192
76
2.0
75
81
3
178
17
29
27
24
1.98
3321--3407
45
1.9
45
92
0
147
39
21
3
35
1.71
4075--4579
278
1.8
278
96
0
931
42
16
16
23
1.88
6489--6561
27
2.7
27
91
2
110
41
10
1
46
1.48
7794--7818
2
12.5
2
100
0
50
48
0
0
52
1.00
10769--10877
51
2.2
51
80
11
118
20
23
12
43
1.86
17612--18093
39
12.4
39
83
0
579
26
35
24
14
1.93
17627--18091
156
3.0
155
89
1
660
26
35
23
14
1.93

Tables:   1

The End!