Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018931.1 Corchorus olitorius cultivar O-4 contig18964, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16472

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6--157
39
3.9
39
77
0
151
24
33
23
18
1.97
1162--1488
41
7.8
43
80
6
359
41
25
11
22
1.86
1162--1488
84
3.9
85
88
4
488
41
25
11
22
1.86
1597--1634
2
19.5
2
89
5
60
47
2
0
50
1.15
7383--7418
19
1.9
18
88
5
54
27
22
8
41
1.82
8974--9103
63
2.1
63
98
0
251
31
19
30
19
1.96
15582--15912
41
7.8
43
85
6
433
42
26
10
20
1.84
15582--15912
84
3.9
85
92
2
544
42
26
10
20
1.84

Tables:   1

The End!