Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018943.1 Corchorus olitorius cultivar O-4 contig18976, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  48031

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11219--11249
12
2.5
12
94
5
53
38
0
0
61
0.96
11218--11249
17
1.9
16
93
6
55
37
0
0
62
0.95
16890--16965
12
6.7
11
71
25
52
42
1
1
55
1.16
16893--16972
23
3.7
21
78
11
65
42
1
1
55
1.16
16897--16961
31
2.1
31
88
2
94
41
1
1
55
1.18
16885--16970
25
3.6
25
72
15
83
43
1
1
54
1.15
36883--36919
13
2.8
14
80
12
51
62
10
0
27
1.28
37296--37340
22
2.0
22
100
0
90
22
22
37
17
1.94
38620--38648
9
3.3
9
95
4
51
44
0
20
34
1.52
38624--38657
17
2.0
17
88
0
50
52
0
20
26
1.46
39863--39992
48
2.7
47
83
5
163
28
16
6
49
1.69
40095--40133
17
2.2
18
86
13
55
71
15
10
2
1.23
43048--43722
225
3.0
225
96
0
1235
39
11
16
32
1.85

Tables:   1

The End!