Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018945.1 Corchorus olitorius cultivar O-4 contig18978, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21973

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4816--4841
4
6.5
4
100
0
52
23
0
0
76
0.78
9089--9124
1
36.0
1
94
0
63
2
0
0
97
0.18
15448--15478
15
2.1
15
100
0
62
22
6
25
45
1.76
15576--15634
31
1.9
31
92
0
100
45
18
11
23
1.83
15576--15641
31
2.1
31
88
0
96
46
18
12
22
1.81
16130--16362
22
10.6
22
77
5
168
39
15
11
33
1.83
16130--16362
66
3.5
64
76
4
198
39
15
11
33
1.83
16507--16715
22
9.5
22
68
10
88
33
15
10
41
1.81
20435--20514
41
2.0
41
94
0
142
41
17
13
27
1.87

Tables:   1

The End!