Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018947.1 Corchorus olitorius cultivar O-4 contig18980, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33681

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
409--462
27
2.0
27
100
0
108
66
3
11
18
1.37
1101--1141
21
2.0
21
100
0
82
36
4
0
58
1.20
5340--5669
122
2.7
124
89
5
490
52
2
9
35
1.48
8447--8491
16
2.8
16
86
3
63
44
37
11
6
1.66
10023--10076
15
3.4
16
80
14
58
42
38
12
5
1.67
18698--18773
33
2.4
30
82
6
89
50
7
27
14
1.71
19378--19560
77
2.6
68
83
14
267
42
14
4
38
1.65
19412--19568
77
2.0
77
100
0
314
43
12
3
40
1.61
19824--19863
21
2.0
21
90
5
64
47
27
12
12
1.77
19819--19912
25
4.0
25
72
18
85
44
26
14
13
1.83
19955--20018
31
2.0
32
84
3
85
32
21
15
29
1.95
20654--21118
48
9.7
48
90
1
720
38
17
26
16
1.91
20654--21118
95
4.9
95
92
0
716
38
17
26
16
1.91
21807--21892
45
1.9
45
83
4
111
40
17
9
32
1.81
22129--22260
52
2.5
53
79
4
144
44
15
7
32
1.74
25151--25191
17
2.4
17
100
0
82
46
12
31
9
1.74
29029--29077
21
2.3
21
82
6
55
40
16
28
14
1.87

Tables:   1

The End!