Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018962.1 Corchorus olitorius cultivar O-4 contig18995, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14681

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7477--7505
2
14.5
2
100
0
58
51
0
0
48
1.00
7568--7694
22
5.7
22
71
5
67
39
15
9
35
1.80
8502--8535
18
1.9
18
88
5
52
14
8
35
41
1.77
8670--8732
11
5.9
11
74
7
67
55
0
3
41
1.16
8672--8728
20
2.7
21
83
5
71
54
0
3
42
1.17
9248--9362
58
2.0
58
100
0
230
24
3
23
48
1.66
11059--11381
161
2.0
161
97
0
610
39
15
18
26
1.90
12068--12122
26
2.1
27
93
3
94
61
18
10
9
1.54
12432--12522
6
16.5
6
78
16
90
34
10
1
53
1.43
12634--14204
783
2.0
784
98
0
3045
37
10
10
41
1.74

Tables:   1

The End!