Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018966.1 Corchorus olitorius cultivar O-4 contig18999, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1832

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
156--189
11
3.0
12
87
12
54
76
8
0
14
1.01
156--189
10
3.1
11
91
8
52
76
8
0
14
1.01
179--253
13
5.6
14
80
13
72
68
14
1
16
1.29
188--245
28
2.1
28
87
6
82
65
15
1
17
1.36
216--253
19
2.1
18
95
5
67
68
15
0
15
1.22
186--253
6
11.7
6
76
14
63
67
14
1
16
1.30
832--1063
50
4.6
50
89
2
340
33
17
15
33
1.92
1680--1828
50
3.0
50
90
3
237
31
27
12
28
1.93

Tables:   1

The End!