Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018972.1 Corchorus olitorius cultivar O-4 contig19005, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27506

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4565--4600
19
1.9
18
88
5
54
33
22
2
41
1.68
7682--7750
35
1.9
36
83
13
90
42
5
2
49
1.41
7905--7945
21
2.0
21
85
0
55
29
17
12
41
1.85
9074--9155
31
2.6
31
90
0
137
41
10
12
35
1.78
10151--10177
14
1.9
14
100
0
54
88
0
11
0
0.50
11534--11606
16
4.6
16
83
6
94
5
13
41
39
1.68
11769--11815
13
3.8
12
78
13
51
55
4
0
40
1.19
12400--12449
23
2.2
23
82
7
57
56
2
8
34
1.40
12883--12915
2
16.0
2
93
6
57
48
0
3
48
1.17
23030--23132
51
2.0
50
81
9
120
21
19
13
45
1.84
25619--25658
21
1.9
21
89
0
62
15
37
20
27
1.92
25772--25981
28
7.5
28
84
4
246
15
17
26
40
1.90
25772--25954
86
2.2
83
89
3
276
15
16
26
40
1.88

Tables:   1

The End!