Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018976.1 Corchorus olitorius cultivar O-4 contig19009, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  42830

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7805--7844
19
2.1
19
100
0
80
25
20
12
42
1.86
14126--14289
31
5.2
31
82
3
166
35
25
22
15
1.94
18759--18824
22
3.0
22
93
0
105
24
31
22
21
1.98
23742--23779
18
2.1
19
90
5
60
28
13
39
18
1.88
25553--25591
18
2.1
19
90
4
62
41
15
17
25
1.89
26294--26335
15
2.7
15
92
3
66
64
14
9
11
1.50
27695--27729
17
1.9
18
88
11
54
34
22
2
40
1.69
28268--28297
15
2.1
15
93
6
53
66
6
13
13
1.43
33309--33352
22
2.0
22
90
0
70
25
34
22
18
1.96
38447--38574
22
5.8
22
73
5
105
33
12
10
43
1.76
38445--38631
22
8.6
22
67
15
102
36
13
8
41
1.75
39334--39410
31
2.5
31
91
0
118
31
16
27
24
1.97
41595--41639
21
2.1
21
91
0
72
22
13
28
35
1.92
41809--42223
207
2.0
207
96
0
769
45
6
11
37
1.65

Tables:   1

The End!