Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018984.1 Corchorus olitorius cultivar O-4 contig19017, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41787

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--26
1
26.0
1
100
0
52
0
0
0
100
0.00
10179--10217
16
2.4
16
80
16
53
71
10
17
0
1.12
12293--12350
10
6.0
10
75
11
50
48
12
1
37
1.51
13580--13729
49
3.1
49
88
2
216
50
18
20
12
1.78
14275--14395
28
4.3
27
84
12
145
16
18
23
42
1.89
14275--14395
55
2.2
56
85
5
156
16
18
23
42
1.89
15037--15111
39
1.9
39
97
0
141
16
28
9
46
1.77
23860--23885
13
2.0
13
100
0
52
30
15
15
38
1.88

Tables:   1

The End!