Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018986.1 Corchorus olitorius cultivar O-4 contig19019, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19986

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1231--1313
37
2.3
37
89
8
134
57
9
21
10
1.61
2134--2624
59
8.3
58
90
2
775
27
15
17
39
1.90
2134--2624
117
4.2
117
92
2
806
27
15
17
39
1.90
2869--2952
28
3.1
27
88
6
125
15
19
25
40
1.90
11931--12157
4
57.5
4
65
16
64
24
9
0
65
1.26
11935--11992
19
3.1
18
80
7
53
27
5
0
67
1.12
11953--12033
27
3.3
27
66
25
79
28
7
1
62
1.29
11932--12102
46
3.7
46
81
12
181
26
9
0
63
1.30
15021--15079
26
2.3
25
80
11
66
71
1
20
6
1.18
16360--16407
22
2.2
22
85
7
62
52
6
29
12
1.63
16437--16578
54
2.6
54
78
6
137
26
18
22
32
1.97
16548--17047
35
13.9
36
83
8
574
25
13
19
42
1.87
17793--17834
15
2.7
15
96
3
75
66
14
7
11
1.43

Tables:   1

The End!