Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018990.1 Corchorus olitorius cultivar O-4 contig19023, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31844

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3183--3228
23
2.0
24
83
12
60
36
4
6
52
1.47
4708--4782
33
2.3
33
92
0
132
24
24
22
29
1.99
12949--12978
15
2.0
15
100
0
60
40
40
13
6
1.71
25810--25981
91
1.9
92
90
1
274
37
17
19
25
1.93
29618--29675
29
2.0
29
86
3
82
20
22
13
43
1.87
29839--29908
30
2.4
30
88
7
108
40
17
25
17
1.90
31584--31653
30
2.4
30
88
7
108
40
17
25
17
1.90

Tables:   1

The End!