Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018992.1 Corchorus olitorius cultivar O-4 contig19025, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9762

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
406--431
13
2.0
13
100
0
52
84
0
0
15
0.62
1999--2036
20
1.9
20
94
0
67
52
7
10
28
1.64
2802--2933
58
2.3
59
85
7
191
24
23
15
37
1.93
4366--4414
1
49.0
1
79
0
53
0
0
10
89
0.48
4355--4415
6
10.7
6
86
10
76
0
0
14
85
0.60
4355--4412
27
2.1
28
93
3
100
0
0
13
86
0.58
9647--9756
42
2.8
36
75
15
103
37
16
14
31
1.89

Tables:   1

The End!