Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018993.1 Corchorus olitorius cultivar O-4 contig19026, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31334

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1074--1347
50
5.5
50
91
3
416
36
11
27
24
1.90
1591--1716
29
4.4
29
90
1
191
19
19
23
37
1.94
6999--7071
32
2.3
32
82
0
92
6
15
38
39
1.74
8195--8289
45
2.1
45
98
0
181
41
8
7
43
1.63
10849--10891
22
1.9
23
95
4
79
37
13
23
25
1.92
17078--17134
25
2.3
26
80
16
68
15
10
0
73
1.09
19531--19574
21
2.1
21
100
0
88
45
22
4
27
1.72
21250--21282
1
33.0
1
100
0
66
0
0
0
100
0.00
26440--26493
21
2.6
21
80
16
60
48
7
12
31
1.69
26575--26622
20
2.3
21
82
7
62
54
12
8
25
1.65

Tables:   1

The End!