Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018994.1 Corchorus olitorius cultivar O-4 contig19027, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35292

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3487--3536
21
2.4
21
83
6
57
56
4
0
40
1.18
3580--3861
97
2.9
98
90
2
433
35
10
14
39
1.81
23747--23788
22
1.9
22
85
9
59
28
11
4
54
1.57
24879--24918
21
1.9
21
85
10
55
17
15
12
55
1.70
27953--27982
15
2.1
15
93
6
53
46
3
6
43
1.46
28276--28348
25
2.9
25
87
0
101
36
9
34
19
1.84
31455--32109
347
1.9
348
94
0
1170
34
21
12
31
1.90

Tables:   1

The End!