Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018996.1 Corchorus olitorius cultivar O-4 contig19029, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10644

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--59
2
29.5
2
100
0
118
0
49
0
50
1.00
1772--2097
53
6.0
55
82
6
371
44
20
10
24
1.83
1782--2131
112
3.2
112
82
6
430
44
21
10
24
1.83
2116--2191
21
3.8
20
79
8
75
39
25
17
18
1.91
2176--2244
34
2.0
36
91
5
115
46
18
8
26
1.78
2242--2317
21
3.8
20
79
8
75
39
25
17
18
1.91
2302--2376
33
2.2
34
90
2
116
48
20
9
22
1.78
2080--2384
126
2.4
127
92
3
515
42
22
12
22
1.87
2336--2440
56
1.9
54
86
3
147
41
24
10
22
1.85
2336--2456
56
2.2
54
83
5
145
40
23
12
23
1.88
4261--4309
19
2.9
16
75
18
55
16
10
10
63
1.52

Tables:   1

The End!