Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019003.1 Corchorus olitorius cultivar O-4 contig19036, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12908

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2660--2699
21
1.9
21
94
0
71
47
0
5
47
1.24
4984--5743
374
2.0
379
89
5
1171
38
11
9
40
1.74
6121--6386
134
2.0
134
78
6
279
39
8
2
49
1.48
10708--10873
60
2.8
60
91
3
289
33
19
20
25
1.97
10704--10871
31
5.5
31
68
16
136
32
20
20
26
1.97
10910--11044
31
4.4
31
72
10
125
24
17
19
38
1.93
10945--11103
60
2.7
60
89
2
230
27
18
17
37
1.93
12382--12849
48
9.8
48
90
2
665
43
20
22
12
1.86
12382--12849
143
3.3
142
87
5
681
43
20
22
12
1.86
12382--12849
191
2.4
192
88
4
687
43
20
22
12
1.86

Tables:   1

The End!