Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019017.1 Corchorus olitorius cultivar O-4 contig19050, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4499

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
561--600
21
1.9
21
89
0
62
50
0
5
45
1.23
555--599
15
3.0
16
81
12
51
53
0
2
44
1.13
558--608
24
2.1
24
85
0
66
49
0
5
45
1.26
877--957
2
40.0
2
80
2
90
48
0
7
44
1.31
2953--3162
105
2.0
104
90
3
332
40
9
6
43
1.63
3375--3724
120
3.0
118
88
7
536
34
24
8
32
1.85

Tables:   1

The End!