Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019022.1 Corchorus olitorius cultivar O-4 contig19055, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10998

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3141--3179
9
4.3
9
87
6
53
46
0
17
35
1.49
4454--4596
49
3.0
47
81
10
148
28
16
5
48
1.69
4655--4711
22
2.4
25
88
8
84
35
19
12
33
1.89
5020--5469
178
2.5
180
81
3
498
33
15
15
35
1.89
8171--8234
28
2.3
28
83
2
76
7
21
0
70
1.12
10357--10400
18
2.4
19
81
7
56
47
20
13
18
1.82

Tables:   1

The End!