Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019034.1 Corchorus olitorius cultivar O-4 contig19067, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6229

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
522--591
36
1.9
36
88
0
104
58
8
11
21
1.59
1692--1725
16
2.1
16
94
0
59
20
5
17
55
1.62
1747--1785
19
2.1
19
100
0
78
25
15
23
35
1.94
4687--4767
39
2.0
40
88
6
121
50
8
4
35
1.55
4877--5287
203
2.0
203
94
1
727
36
10
8
43
1.70
5790--5859
36
1.9
36
91
0
113
60
8
10
21
1.55

Tables:   1

The End!