Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019047.1 Corchorus olitorius cultivar O-4 contig19080, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13212

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12177--12632
35
12.6
35
78
6
408
18
19
19
42
1.90
12315--12345
10
3.1
10
100
0
62
19
9
9
61
1.54
12248--12417
83
2.1
80
82
5
198
18
17
18
46
1.84
12323--12592
106
2.5
106
89
3
409
17
18
19
44
1.87
12323--12632
106
2.9
105
83
6
365
18
18
19
43
1.88
12330--12632
141
2.1
143
84
5
391
18
19
19
42
1.89
12903--13212
30
10.5
30
92
3
513
20
13
20
45
1.84
12903--13212
146
2.1
148
92
3
518
20
13
20
45
1.84

Tables:   1

The End!