Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019048.1 Corchorus olitorius cultivar O-4 contig19081, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  64452

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15247--15273
2
13.5
2
100
0
54
48
0
0
51
1.00
19046--19080
2
17.5
2
87
0
52
48
5
0
45
1.26
19790--19988
49
4.0
49
88
2
254
37
10
27
25
1.88
45347--45419
27
2.9
25
78
8
85
42
8
12
36
1.72
45966--46032
27
2.5
24
77
20
62
19
17
26
35
1.94
48724--48817
41
2.3
41
85
1
136
24
15
13
45
1.83
58877--58937
30
2.0
30
96
0
113
19
21
6
52
1.68
59994--60018
10
2.5
10
100
0
50
36
28
8
28
1.85
63299--63425
36
3.4
37
77
5
132
19
39
16
24
1.92

Tables:   1

The End!