Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01001906.1 Corchorus olitorius cultivar O-4 contig01906, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10308

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1189--1273
41
2.1
41
84
4
109
43
9
5
41
1.61
3056--3116
30
2.2
28
83
13
81
45
13
3
37
1.59
3064--3123
30
2.0
30
96
0
111
41
16
3
38
1.65
3666--3692
6
4.5
6
100
0
54
48
0
51
0
1.00
9964--10006
21
2.0
21
90
0
68
18
44
6
30
1.76
9972--10012
21
1.9
21
90
5
64
14
46
12
26
1.80

Tables:   1

The End!