Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019062.1 Corchorus olitorius cultivar O-4 contig19095, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27993

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1072--1122
24
2.1
25
85
3
68
17
5
5
70
1.28
6042--6092
24
2.1
25
85
3
68
17
5
5
70
1.28
15211--15279
29
2.3
30
85
7
86
18
17
18
44
1.86
25107--25142
2
19.5
2
83
16
51
52
0
0
47
1.00
26262--26291
15
1.9
16
93
6
53
43
0
3
53
1.17
26655--27972
331
4.0
329
79
7
1320
34
14
14
36
1.87
27964--27993
2
15.0
2
100
0
60
50
0
0
50
1.00

Tables:   1

The End!