Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019067.1 Corchorus olitorius cultivar O-4 contig19100, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7521

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
950--1043
22
4.2
21
72
9
62
44
12
12
29
1.80
2638--2663
4
6.5
4
100
0
52
0
23
0
76
0.78
2811--2837
2
13.5
2
100
0
54
51
0
0
48
1.00
4994--5082
34
2.6
35
82
8
94
35
2
5
56
1.35
5465--5534
31
2.4
27
88
9
95
18
21
17
42
1.89
5465--5534
30
2.4
27
82
13
86
18
21
17
42
1.89
5865--5930
29
2.2
30
86
2
89
46
13
18
21
1.83

Tables:   1

The End!